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ex vivo diffusion tensor imaging dti  (Bruker Corporation)


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    Structured Review

    Bruker Corporation ex vivo diffusion tensor imaging dti
    Ex Vivo Diffusion Tensor Imaging Dti, supplied by Bruker Corporation, used in various techniques. Bioz Stars score: 97/100, based on 3082 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/diffusion-tensor+imaging/Diffusion/pm40609698-53-0-16
    Average 97 stars, based on 3082 article reviews
    ex vivo diffusion tensor imaging dti - by Bioz Stars, 2026-09
    97/100 stars

    Images

    Related Articles

    Diffusion-based Assay:

    Article Title: Ultrahigh-resolution 7-Tesla anatomic magnetic resonance imaging and diffusion tensor imaging of ex vivo formalin-fixed human brainstem-cerebellum complex
    Article Snippet: .. Diffusion tensor imaging (DTI) lasted 48 h and 48 min, and subsequent anatomical imaging was performed using a 7-Tesla (7T) MRI system (Bruker Biospec 70/30 with 30-cm bore size) equipped with a 70-mm volume coil. ..

    Article Title: Automated quality control of small animal MR neuroimaging data
    Article Snippet: T2w, GE-EPI TurboRARE /rs-fMRI Nifti 12 (multiple time points) 20 Wenk 94_m_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, T2STAR, AUDISTIM Bruker raw 46/32/25 21 Wenk/Gonca lves 94_r_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, RSFMRI_E XPERIMEN T Bruker raw 46/32/25 22 Wenk/Michal ek 94_g_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_TURBO RARE, NON_ROT ATING_EPI Bruker raw 46/32/25 23 Longo 7_m_Lo In vivo mouse abdominal 7T MicroImaging Bruker Avance III, 1H 30mm TX/RX body volume coil T2w, DTI T2 mic_rare, DtiEpi Bruker raw 20 1ex vivo. .. Abbreviations: DTI (Diffusion Tensor Imaging), NA (details not available), rs-fMRI (resting-state functional MRI), T2w (T2-weighted MRI), Tx (transmit coil), Rx (Receive coil) Supplementary Table II: Summary of published datasets used for testing AIDAqc Repository Species /Target Scanner Sequences Data types Ref. 1 Aswendt Mouse 9.4T Bruker, cryocoil T2-weighted, rs-fMRI Bruker raw [63] https://doi.org/10.17617/3.5p 2 Jelescu Rat 14T Varian System T2-weighted, DTI, rs-fMRI Nifti https://openneuro.org/datasets/ds003520/versions/1.0.2 https://openneuro.org/datasets/ds004441/versions/1.0.1 Supplementary Table III: Confusion matrix visualizing the statistical definition used to classify the data. ..

    Article Title: Dietary n-3 polyunsaturated fatty acids intervention ameliorates cognitive dysfunction in db/db mice by mitigating cortical insulin resistance, mitochondrial dysfunction, and energy metabolism impairment.
    Article Snippet: Ultrastructural analysis was 227 performed with a transmission electron microscope (JEOL, JEM-2100, JPN), and 228 representative images were captured. .. 229 2.12 Diffusion tensor imaging (DTI) 230 According to the previously described methods[24], brain DTI was performed using a 231 small animal MRI system (Bruker, PharmaScan 7.0/16 US, GER) at the Core 232 Facilities Center of Capital Medical University. ..

    Article Title: Female 3xTg-AD mice demonstrate hyperexcitability phenotype of Alzheimer’s disease in structure-function and function-behavior relationships
    Article Snippet: .. Functional MRI and diffusion tensor images were acquired on a 9.4T MRI scanner (BioSpec 94/30 USR; Bruker Biospin MRI, Ettilingen, Germany), with a four-element mouse brain surface coil and an 86-mm volume transmit coil, with ParaVision 360 V3.2. ..

    Article Title: Leukemia Inhibitory Factor as a late-stage treatment for delayed white matter loss in concussive head injury
    Article Snippet: Then, the brains were placed into a custom-built MRI-compatible tube filled with Fluorinert, an MRI susceptibility-matching fluid (Sigma-Aldrich, Inc., St. Louis, MO). .. Microstructural integrity was assessed using ex-vivo diffusion tensor imaging (DTI) of the brain samples using a horizontal bore 9.4T scanner (Bruker BioSpin, Billerica, MA). .. Each brain sample was glued to a plastic slide and placed in a 10ml plastic syringe filled with Fluorinert FC-43 (3MTM) (Sigma-Aldrich, St. Louis, MO, USA), a susceptibility-matched fluorocarbon-based fluid that generates no MRI signal.

    Article Title: Macroscopic brain region and network changes in a central-arterial-stiffness rat model.
    Article Snippet: Following immersion in 4% paraformaldehyde for 1 week, whole-brain tissues were placed in a 0.2-mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing phosphate-buffered saline for 1–2 weeks. .. Ex vivo diffusion tensor imaging (DTI) was performed using a 7.0 T MRI system (Biospec; 70/16 Bruker BioSpin, Ettlingen, Germany) equipped with actively shielded gradients at a maximum strength of 700 mT/m using a 23-mm volume coil (Bruker Biospin, Ettlingen, Germany). ..

    Article Title: MRI R2* captures inflammation in disconnected brain structures after stroke: a translational study
    Article Snippet: .. Group 3 of mice (n=41) underwent ex vivo long-scan acquisition (9 hours) on the 7T Bruker for high-resolution diffusion tensor imaging (parameters in supplemental). ..

    Article Title: NAD + -boosting agent nicotinamide mononucleotide potently improves mitochondria stress response in Alzheimer’s disease via ATF4-dependent mitochondrial UPR
    Article Snippet: Incubate at 37 °C for 30 min. After being washed with pre-warmed PBS three times, it was stained with DRAQ5 (Thermo Scientific, catalog no.62254) and immediately observed under a microscope. .. High-resolution T2-weighted images and diffusion tensor imaging (DTI) were obtained using a 9.4 T BioSpec 117/16 USR scanner (Bruker BioSpin, Germany), operated with ParaVision® 6.0 (Bruker BioSpin), using orthogonal 1H volume coils (for mouse head imaging, ≥23 mm inner diameter) [ ]. ..

    Imaging:

    Article Title: Ultrahigh-resolution 7-Tesla anatomic magnetic resonance imaging and diffusion tensor imaging of ex vivo formalin-fixed human brainstem-cerebellum complex
    Article Snippet: .. Diffusion tensor imaging (DTI) lasted 48 h and 48 min, and subsequent anatomical imaging was performed using a 7-Tesla (7T) MRI system (Bruker Biospec 70/30 with 30-cm bore size) equipped with a 70-mm volume coil. ..

    Article Title: Automated quality control of small animal MR neuroimaging data
    Article Snippet: T2w, GE-EPI TurboRARE /rs-fMRI Nifti 12 (multiple time points) 20 Wenk 94_m_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, T2STAR, AUDISTIM Bruker raw 46/32/25 21 Wenk/Gonca lves 94_r_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, RSFMRI_E XPERIMEN T Bruker raw 46/32/25 22 Wenk/Michal ek 94_g_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_TURBO RARE, NON_ROT ATING_EPI Bruker raw 46/32/25 23 Longo 7_m_Lo In vivo mouse abdominal 7T MicroImaging Bruker Avance III, 1H 30mm TX/RX body volume coil T2w, DTI T2 mic_rare, DtiEpi Bruker raw 20 1ex vivo. .. Abbreviations: DTI (Diffusion Tensor Imaging), NA (details not available), rs-fMRI (resting-state functional MRI), T2w (T2-weighted MRI), Tx (transmit coil), Rx (Receive coil) Supplementary Table II: Summary of published datasets used for testing AIDAqc Repository Species /Target Scanner Sequences Data types Ref. 1 Aswendt Mouse 9.4T Bruker, cryocoil T2-weighted, rs-fMRI Bruker raw [63] https://doi.org/10.17617/3.5p 2 Jelescu Rat 14T Varian System T2-weighted, DTI, rs-fMRI Nifti https://openneuro.org/datasets/ds003520/versions/1.0.2 https://openneuro.org/datasets/ds004441/versions/1.0.1 Supplementary Table III: Confusion matrix visualizing the statistical definition used to classify the data. ..

    Article Title: Dietary n-3 polyunsaturated fatty acids intervention ameliorates cognitive dysfunction in db/db mice by mitigating cortical insulin resistance, mitochondrial dysfunction, and energy metabolism impairment.
    Article Snippet: Ultrastructural analysis was 227 performed with a transmission electron microscope (JEOL, JEM-2100, JPN), and 228 representative images were captured. .. 229 2.12 Diffusion tensor imaging (DTI) 230 According to the previously described methods[24], brain DTI was performed using a 231 small animal MRI system (Bruker, PharmaScan 7.0/16 US, GER) at the Core 232 Facilities Center of Capital Medical University. ..

    Article Title: Leukemia Inhibitory Factor as a late-stage treatment for delayed white matter loss in concussive head injury
    Article Snippet: Then, the brains were placed into a custom-built MRI-compatible tube filled with Fluorinert, an MRI susceptibility-matching fluid (Sigma-Aldrich, Inc., St. Louis, MO). .. Microstructural integrity was assessed using ex-vivo diffusion tensor imaging (DTI) of the brain samples using a horizontal bore 9.4T scanner (Bruker BioSpin, Billerica, MA). .. Each brain sample was glued to a plastic slide and placed in a 10ml plastic syringe filled with Fluorinert FC-43 (3MTM) (Sigma-Aldrich, St. Louis, MO, USA), a susceptibility-matched fluorocarbon-based fluid that generates no MRI signal.

    Article Title: Macroscopic brain region and network changes in a central-arterial-stiffness rat model.
    Article Snippet: Following immersion in 4% paraformaldehyde for 1 week, whole-brain tissues were placed in a 0.2-mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing phosphate-buffered saline for 1–2 weeks. .. Ex vivo diffusion tensor imaging (DTI) was performed using a 7.0 T MRI system (Biospec; 70/16 Bruker BioSpin, Ettlingen, Germany) equipped with actively shielded gradients at a maximum strength of 700 mT/m using a 23-mm volume coil (Bruker Biospin, Ettlingen, Germany). ..

    Article Title: MRI R2* captures inflammation in disconnected brain structures after stroke: a translational study
    Article Snippet: .. Group 3 of mice (n=41) underwent ex vivo long-scan acquisition (9 hours) on the 7T Bruker for high-resolution diffusion tensor imaging (parameters in supplemental). ..

    Article Title: NAD + -boosting agent nicotinamide mononucleotide potently improves mitochondria stress response in Alzheimer’s disease via ATF4-dependent mitochondrial UPR
    Article Snippet: Incubate at 37 °C for 30 min. After being washed with pre-warmed PBS three times, it was stained with DRAQ5 (Thermo Scientific, catalog no.62254) and immediately observed under a microscope. .. High-resolution T2-weighted images and diffusion tensor imaging (DTI) were obtained using a 9.4 T BioSpec 117/16 USR scanner (Bruker BioSpin, Germany), operated with ParaVision® 6.0 (Bruker BioSpin), using orthogonal 1H volume coils (for mouse head imaging, ≥23 mm inner diameter) [ ]. ..

    Magnetic Resonance Imaging:

    Article Title: Ultrahigh-resolution 7-Tesla anatomic magnetic resonance imaging and diffusion tensor imaging of ex vivo formalin-fixed human brainstem-cerebellum complex
    Article Snippet: .. Diffusion tensor imaging (DTI) lasted 48 h and 48 min, and subsequent anatomical imaging was performed using a 7-Tesla (7T) MRI system (Bruker Biospec 70/30 with 30-cm bore size) equipped with a 70-mm volume coil. ..

    Article Title: Automated quality control of small animal MR neuroimaging data
    Article Snippet: T2w, GE-EPI TurboRARE /rs-fMRI Nifti 12 (multiple time points) 20 Wenk 94_m_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, T2STAR, AUDISTIM Bruker raw 46/32/25 21 Wenk/Gonca lves 94_r_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, RSFMRI_E XPERIMEN T Bruker raw 46/32/25 22 Wenk/Michal ek 94_g_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_TURBO RARE, NON_ROT ATING_EPI Bruker raw 46/32/25 23 Longo 7_m_Lo In vivo mouse abdominal 7T MicroImaging Bruker Avance III, 1H 30mm TX/RX body volume coil T2w, DTI T2 mic_rare, DtiEpi Bruker raw 20 1ex vivo. .. Abbreviations: DTI (Diffusion Tensor Imaging), NA (details not available), rs-fMRI (resting-state functional MRI), T2w (T2-weighted MRI), Tx (transmit coil), Rx (Receive coil) Supplementary Table II: Summary of published datasets used for testing AIDAqc Repository Species /Target Scanner Sequences Data types Ref. 1 Aswendt Mouse 9.4T Bruker, cryocoil T2-weighted, rs-fMRI Bruker raw [63] https://doi.org/10.17617/3.5p 2 Jelescu Rat 14T Varian System T2-weighted, DTI, rs-fMRI Nifti https://openneuro.org/datasets/ds003520/versions/1.0.2 https://openneuro.org/datasets/ds004441/versions/1.0.1 Supplementary Table III: Confusion matrix visualizing the statistical definition used to classify the data. ..

    Article Title: Dietary n-3 polyunsaturated fatty acids intervention ameliorates cognitive dysfunction in db/db mice by mitigating cortical insulin resistance, mitochondrial dysfunction, and energy metabolism impairment.
    Article Snippet: Ultrastructural analysis was 227 performed with a transmission electron microscope (JEOL, JEM-2100, JPN), and 228 representative images were captured. .. 229 2.12 Diffusion tensor imaging (DTI) 230 According to the previously described methods[24], brain DTI was performed using a 231 small animal MRI system (Bruker, PharmaScan 7.0/16 US, GER) at the Core 232 Facilities Center of Capital Medical University. ..

    Article Title: Female 3xTg-AD mice demonstrate hyperexcitability phenotype of Alzheimer’s disease in structure-function and function-behavior relationships
    Article Snippet: .. Functional MRI and diffusion tensor images were acquired on a 9.4T MRI scanner (BioSpec 94/30 USR; Bruker Biospin MRI, Ettilingen, Germany), with a four-element mouse brain surface coil and an 86-mm volume transmit coil, with ParaVision 360 V3.2. ..

    Article Title: Macroscopic brain region and network changes in a central-arterial-stiffness rat model.
    Article Snippet: Following immersion in 4% paraformaldehyde for 1 week, whole-brain tissues were placed in a 0.2-mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing phosphate-buffered saline for 1–2 weeks. .. Ex vivo diffusion tensor imaging (DTI) was performed using a 7.0 T MRI system (Biospec; 70/16 Bruker BioSpin, Ettlingen, Germany) equipped with actively shielded gradients at a maximum strength of 700 mT/m using a 23-mm volume coil (Bruker Biospin, Ettlingen, Germany). ..

    Functional Assay:

    Article Title: Automated quality control of small animal MR neuroimaging data
    Article Snippet: T2w, GE-EPI TurboRARE /rs-fMRI Nifti 12 (multiple time points) 20 Wenk 94_m_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, T2STAR, AUDISTIM Bruker raw 46/32/25 21 Wenk/Gonca lves 94_r_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, RSFMRI_E XPERIMEN T Bruker raw 46/32/25 22 Wenk/Michal ek 94_g_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_TURBO RARE, NON_ROT ATING_EPI Bruker raw 46/32/25 23 Longo 7_m_Lo In vivo mouse abdominal 7T MicroImaging Bruker Avance III, 1H 30mm TX/RX body volume coil T2w, DTI T2 mic_rare, DtiEpi Bruker raw 20 1ex vivo. .. Abbreviations: DTI (Diffusion Tensor Imaging), NA (details not available), rs-fMRI (resting-state functional MRI), T2w (T2-weighted MRI), Tx (transmit coil), Rx (Receive coil) Supplementary Table II: Summary of published datasets used for testing AIDAqc Repository Species /Target Scanner Sequences Data types Ref. 1 Aswendt Mouse 9.4T Bruker, cryocoil T2-weighted, rs-fMRI Bruker raw [63] https://doi.org/10.17617/3.5p 2 Jelescu Rat 14T Varian System T2-weighted, DTI, rs-fMRI Nifti https://openneuro.org/datasets/ds003520/versions/1.0.2 https://openneuro.org/datasets/ds004441/versions/1.0.1 Supplementary Table III: Confusion matrix visualizing the statistical definition used to classify the data. ..

    Article Title: Female 3xTg-AD mice demonstrate hyperexcitability phenotype of Alzheimer’s disease in structure-function and function-behavior relationships
    Article Snippet: .. Functional MRI and diffusion tensor images were acquired on a 9.4T MRI scanner (BioSpec 94/30 USR; Bruker Biospin MRI, Ettilingen, Germany), with a four-element mouse brain surface coil and an 86-mm volume transmit coil, with ParaVision 360 V3.2. ..

    Ex Vivo:

    Article Title: Macroscopic brain region and network changes in a central-arterial-stiffness rat model.
    Article Snippet: Following immersion in 4% paraformaldehyde for 1 week, whole-brain tissues were placed in a 0.2-mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing phosphate-buffered saline for 1–2 weeks. .. Ex vivo diffusion tensor imaging (DTI) was performed using a 7.0 T MRI system (Biospec; 70/16 Bruker BioSpin, Ettlingen, Germany) equipped with actively shielded gradients at a maximum strength of 700 mT/m using a 23-mm volume coil (Bruker Biospin, Ettlingen, Germany). ..

    Article Title: MRI R2* captures inflammation in disconnected brain structures after stroke: a translational study
    Article Snippet: .. Group 3 of mice (n=41) underwent ex vivo long-scan acquisition (9 hours) on the 7T Bruker for high-resolution diffusion tensor imaging (parameters in supplemental). ..



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